PERNICE, Simone
PERNICE, Simone
INFORMATICA
A computational approach based on the colored Petri net formalism for studying multiple sclerosis
2019-01-01 Pernice S.; Pennisi M.; Romano G.; Maglione A.; Cutrupi S.; Pappalardo F.; Balbo G.; Beccuti M.; Cordero F.; Calogero R.A.
A computational framework for modeling and studying pertussis epidemiology and vaccination
2020-01-01 Castagno P.; Pernice S.; Ghetti G.; Povero M.; Pradelli L.; Paolotti D.; Balbo G.; Sereno M.; Beccuti M.
A new computational workflow to guide personalized drug therapy
2023-01-01 Pernice, Simone; Maglione, Alessandro; Tortarolo, Dora; Sirovich, Roberta; Clerico, Marinella; Rolla, Simona; Beccuti, Marco; Cordero, Francesca
A Petri net formalism to study systems at different scales exploiting agent-based and stochastic simulations.
2021-01-01 Beccuti, M., Castagno, P., Franceschinis, G., Pennisi, M., Pernice, S.
A Tool for the Automatic Derivation of Symbolic ODE from Symmetric Net Models
2019-01-01 Marco Beccuti, Lorenzo Capra, Massimiliano De Pierro, Giuliana Franceschinis, Laura Follia, Simone Pernice
An Agent-Based Model to Support Infection Control Strategies at School
2022-01-01 Baccega Daniele, Pernice Simone, Terna Pietro, Castagno Paolo, Moirano Giovenale, Richiardi Lorenzo, Sereno Matteo, Rabellino Sergio, Maule Milena, Beccuti Marco
Artificial intelligence methods for biomedical imaging and omics data
2023-01-01 Barbano C.A.; Beccuti M.; Cordero F.; Ivanov D.N.; Licheri N.; Pernice S.; Presta A.; Renzulli R.; Grangetto M.
Computational modeling of the immune response in multiple sclerosis using epimod framework
2020-01-01 Pernice S.; Follia L.; Maglione A.; Pennisi M.; Pappalardo F.; Novelli F.; Clerico M.; Beccuti M.; Cordero F.; Rolla S.
CONNECTOR, fitting and clustering of longitudinal data to reveal a new risk stratification system
2023-01-01 Pernice, Simone; Sirovich, Roberta; Grassi, Elena; Viviani, Marco; Ferri, Martina; Sassi, Francesco; Alessandrì, Luca; Tortarolo, Dora; Calogero, Raffaele A; Trusolino, Livio; Bertotti, Andrea; Beccuti, Marco; Olivero, Martina; Cordero, Francesca
CREDO: a friendly Customizable, REproducible, DOcker file generator for bioinformatics applications
2024-01-01 Alessandri, Simone; Ratto, Maria L.; Rabellino, Sergio; Piacenti, Gabriele; Contaldo, Sandro Gepiro; Pernice, Simone; Beccuti, Marco; Calogero, Raffaele A.; Alessandri, Luca
Deriving Symbolic Ordinary Differential Equations from Stochastic Symmetric Nets Without Unfolding
2018-01-01 Marco Beccuti, Lorenzo Capra, Massimiliano De Pierro, Giuliana Franceschinis, Simone Pernice
Dissecting MRD Kinetics By Automated Computational Analysis to Improve Outcome Prediction in Mantle Cell Lymphoma: A Bioinformatic Substudy from the Fondazione Italiana Linfomi (FIL) MCL0208 Clinical Trial
2022-01-01 Francesca Cordero, Simone Ferrero, Simone Pernice, Elisa Genuardi, Roberta Sirovich, Beatrice Alessandria, Andrea Evangelista, Simone Ragaini, Maurizio Martelli, Alice Di Rocco, Alessandro Re, Chiara Pagani, Vittorio Stefoni, Federica Cavallo, Carola Boccomini, Monica Balzarotti, Vittorio Ruggero Zilioli, Maria Gomes da Silva, Luca Arcaini, Melania Celli, Gian Maria Zaccaria, Dora Tortarolo, Sergio Cortelazzo, Marco Ladetto
Estimating Daclizumab effects in Multiple Sclerosis using Stochastic Symmetric Nets
2018-01-01 Pernice S., Beccuti M., Do P., Pennisi M., Pappalardo F.
Exploiting Stochastic Petri Net formalism to capture the Relapsing Remitting Multiple Sclerosis variability under Daclizumab administration
2019-01-01 Pernice S.; Romano G.; Russo G.; Beccuti M.; Pennisi M.; Pappalardo F.
From compositional Petri Net modeling to macro and micro simulation by means of Stochastic Simulation and Agent-Based models
2023-01-01 Amparore, Elvio; Beccuti, Marco; Castagno, Paolo; Pernice, Simone; Franceschinis, Giuliana; Pennisi, Marzio
GPU accelerated analysis of treg-teff cross regulation in relapsing-remitting multiple sclerosis
2019-01-01 Beccuti M.; Cazzaniga P.; Pennisi M.; Besozzi D.; Nobile M.S.; Pernice S.; Russo G.; Tangherloni A.; Pappalardo F.
How the Competition for Cysteine May Promote Infection of SARS-CoV-2 by Triggering Oxidative Stress
2023-01-01 Vernone A.; Bergandi L.; Pernice S.; Pescarmona G.; Silvagno F.
Impacts of reopening strategies for COVID-19 epidemic: a modeling study in Piedmont region
2020-01-01 Pernice S.; Castagno P.; Marcotulli L.; Maule M.M.; Richiardi L.; Moirano G.; Sereno M.; Cordero F.; Beccuti M.
Integrating Petri Nets and Flux Balance Methods in Computational Biology Models: a Methodological and Computational Practice
2020-01-01 Simone Pernice, Laura Follia, Gianfranco Balbo, Luciano Milanesi, Giulia Sartini, Niccolò Totis, Pietro Liò, Ivan Merelli, Francesca Cordero, Marco Beccuti
MethylFASTQ: A Tool Simulating Bisulfite Sequencing Data
2019-01-01 Piaggeschi, Giulia; Licheri, Nicola; Romano, Greta; Pernice, Simone; Follia, Laura; Ferrero, Giulio
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| A computational approach based on the colored Petri net formalism for studying multiple sclerosis | 2019 | Pernice S.; Pennisi M.; Romano G.; Maglione A.; Cutrupi S.; Pappalardo F.; Balbo G.; Beccuti M.; Cordero F.; Calogero R.A. | |
| A computational framework for modeling and studying pertussis epidemiology and vaccination | 2020 | Castagno P.; Pernice S.; Ghetti G.; Povero M.; Pradelli L.; Paolotti D.; Balbo G.; Sereno M.; Beccuti M. | |
| A new computational workflow to guide personalized drug therapy | 2023 | Pernice, Simone; Maglione, Alessandro; Tortarolo, Dora; Sirovich, Roberta; Clerico, Marinella; Rolla, Simona; Beccuti, Marco; Cordero, Francesca | |
| A Petri net formalism to study systems at different scales exploiting agent-based and stochastic simulations. | 2021 | Beccuti, M., Castagno, P., Franceschinis, G., Pennisi, M., Pernice, S. | |
| A Tool for the Automatic Derivation of Symbolic ODE from Symmetric Net Models | 2019 | Marco Beccuti, Lorenzo Capra, Massimiliano De Pierro, Giuliana Franceschinis, Laura Follia, Simone Pernice | |
| An Agent-Based Model to Support Infection Control Strategies at School | 2022 | Baccega Daniele, Pernice Simone, Terna Pietro, Castagno Paolo, Moirano Giovenale, Richiardi Lorenzo, Sereno Matteo, Rabellino Sergio, Maule Milena, Beccuti Marco | |
| Artificial intelligence methods for biomedical imaging and omics data | 2023 | Barbano C.A.; Beccuti M.; Cordero F.; Ivanov D.N.; Licheri N.; Pernice S.; Presta A.; Renzulli R.; Grangetto M. | |
| Computational modeling of the immune response in multiple sclerosis using epimod framework | 2020 | Pernice S.; Follia L.; Maglione A.; Pennisi M.; Pappalardo F.; Novelli F.; Clerico M.; Beccuti M.; Cordero F.; Rolla S. | |
| CONNECTOR, fitting and clustering of longitudinal data to reveal a new risk stratification system | 2023 | Pernice, Simone; Sirovich, Roberta; Grassi, Elena; Viviani, Marco; Ferri, Martina; Sassi, Francesco; Alessandrì, Luca; Tortarolo, Dora; Calogero, Raffaele A; Trusolino, Livio; Bertotti, Andrea; Beccuti, Marco; Olivero, Martina; Cordero, Francesca | |
| CREDO: a friendly Customizable, REproducible, DOcker file generator for bioinformatics applications | 2024 | Alessandri, Simone; Ratto, Maria L.; Rabellino, Sergio; Piacenti, Gabriele; Contaldo, Sandro Gepiro; Pernice, Simone; Beccuti, Marco; Calogero, Raffaele A.; Alessandri, Luca | |
| Deriving Symbolic Ordinary Differential Equations from Stochastic Symmetric Nets Without Unfolding | 2018 | Marco Beccuti, Lorenzo Capra, Massimiliano De Pierro, Giuliana Franceschinis, Simone Pernice | |
| Dissecting MRD Kinetics By Automated Computational Analysis to Improve Outcome Prediction in Mantle Cell Lymphoma: A Bioinformatic Substudy from the Fondazione Italiana Linfomi (FIL) MCL0208 Clinical Trial | 2022 | Francesca Cordero, Simone Ferrero, Simone Pernice, Elisa Genuardi, Roberta Sirovich, Beatrice Alessandria, Andrea Evangelista, Simone Ragaini, Maurizio Martelli, Alice Di Rocco, Alessandro Re, Chiara Pagani, Vittorio Stefoni, Federica Cavallo, Carola Boccomini, Monica Balzarotti, Vittorio Ruggero Zilioli, Maria Gomes da Silva, Luca Arcaini, Melania Celli, Gian Maria Zaccaria, Dora Tortarolo, Sergio Cortelazzo, Marco Ladetto | |
| Estimating Daclizumab effects in Multiple Sclerosis using Stochastic Symmetric Nets | 2018 | Pernice S., Beccuti M., Do P., Pennisi M., Pappalardo F. | |
| Exploiting Stochastic Petri Net formalism to capture the Relapsing Remitting Multiple Sclerosis variability under Daclizumab administration | 2019 | Pernice S.; Romano G.; Russo G.; Beccuti M.; Pennisi M.; Pappalardo F. | |
| From compositional Petri Net modeling to macro and micro simulation by means of Stochastic Simulation and Agent-Based models | 2023 | Amparore, Elvio; Beccuti, Marco; Castagno, Paolo; Pernice, Simone; Franceschinis, Giuliana; Pennisi, Marzio | |
| GPU accelerated analysis of treg-teff cross regulation in relapsing-remitting multiple sclerosis | 2019 | Beccuti M.; Cazzaniga P.; Pennisi M.; Besozzi D.; Nobile M.S.; Pernice S.; Russo G.; Tangherloni A.; Pappalardo F. | |
| How the Competition for Cysteine May Promote Infection of SARS-CoV-2 by Triggering Oxidative Stress | 2023 | Vernone A.; Bergandi L.; Pernice S.; Pescarmona G.; Silvagno F. | |
| Impacts of reopening strategies for COVID-19 epidemic: a modeling study in Piedmont region | 2020 | Pernice S.; Castagno P.; Marcotulli L.; Maule M.M.; Richiardi L.; Moirano G.; Sereno M.; Cordero F.; Beccuti M. | |
| Integrating Petri Nets and Flux Balance Methods in Computational Biology Models: a Methodological and Computational Practice | 2020 | Simone Pernice, Laura Follia, Gianfranco Balbo, Luciano Milanesi, Giulia Sartini, Niccolò Totis, Pietro Liò, Ivan Merelli, Francesca Cordero, Marco Beccuti | |
| MethylFASTQ: A Tool Simulating Bisulfite Sequencing Data | 2019 | Piaggeschi, Giulia; Licheri, Nicola; Romano, Greta; Pernice, Simone; Follia, Laura; Ferrero, Giulio |