Species sampling problems have regained popularity in recent years due to their frequent appearance in challenging applications arising from ecology, genetics, linguistic, etc. Interest often lies in estimating the number of rare species that appear in a sample, that is species with a frequency smaller than a specific abundance threshold. The Bayesian nonparametric approach has proved successful by providing closed form estimators for rare species variety. In this paper we present a novel methodology for endowing such estimators with asymptotic credible intervals. We illustrate it through the analysis of some genomic datasets.
Uncertainty quantification for Bayesian nonparametric estimators of rare species variety
FAVARO, STEFANO;NIPOTI, BERNARDO
2014-01-01
Abstract
Species sampling problems have regained popularity in recent years due to their frequent appearance in challenging applications arising from ecology, genetics, linguistic, etc. Interest often lies in estimating the number of rare species that appear in a sample, that is species with a frequency smaller than a specific abundance threshold. The Bayesian nonparametric approach has proved successful by providing closed form estimators for rare species variety. In this paper we present a novel methodology for endowing such estimators with asymptotic credible intervals. We illustrate it through the analysis of some genomic datasets.File | Dimensione | Formato | |
---|---|---|---|
FAVARO_NIPOTI_SIS14_revision.pdf
Accesso aperto
Tipo di file:
POSTPRINT (VERSIONE FINALE DELL’AUTORE)
Dimensione
320.74 kB
Formato
Adobe PDF
|
320.74 kB | Adobe PDF | Visualizza/Apri |
I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.