In the era of big and omics data, good organization, management, and description of experimental data are crucial for achieving high-quality datasets. This, in turn, is essential for the export of robust results, to publish reliable papers, make data more easily available, and unlock the huge potential of data reuse. Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. In detail, the guidelines include recommendations for the organization of data and metadata regarding (i) meaningful information on experimental design and phenotyping, (ii) sample collection, (iii) sample preparation, (iv) chemotype analysis, (v) data analysis (vi) metabolite annotation, and (vii) basic ontologies. We hope that these guidelines will be helpful for the grapevine and wine metabolomics community and that it will benefit from the true potential of data usage in creating new knowledge being revealed.

Grapevine and wine metabolomics-based guidelines for fair data and metadata management

Savoi S.
First
;
Pezzotti M.
;
Mattivi F.
Last
2021

Abstract

In the era of big and omics data, good organization, management, and description of experimental data are crucial for achieving high-quality datasets. This, in turn, is essential for the export of robust results, to publish reliable papers, make data more easily available, and unlock the huge potential of data reuse. Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. In detail, the guidelines include recommendations for the organization of data and metadata regarding (i) meaningful information on experimental design and phenotyping, (ii) sample collection, (iii) sample preparation, (iv) chemotype analysis, (v) data analysis (vi) metabolite annotation, and (vii) basic ontologies. We hope that these guidelines will be helpful for the grapevine and wine metabolomics community and that it will benefit from the true potential of data usage in creating new knowledge being revealed.
11
11
757
772
Chromatography; Mass spectrometry; Metabolites; Omics; Open-data; Plants; Vitis; Wine
Savoi S.; Arapitsas P.; Duchene E.; Nikolantonaki M.; Ontanon I.; Carlin S.; Schwander F.; Gougeon R.D.; Ferreira A.C.S.; Theodoridis G.; Topfer R.; Vrhovsek U.; Adam-Blondon A.-F.; Pezzotti M.; Mattivi F.
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2318/1832730
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