Traditional staining normalization approaches, e.g. Macenko, typically rely on the choice of a single representative reference image, which may not adequately account for the diverse staining patterns of datasets collected in practical scenarios. In this study, we introduce a novel approach that leverages multiple reference images to enhance robustness against stain variation. Our method is parameter-free and can be adopted in existing computational pathology pipelines with no significant changes. We evaluate the effectiveness of our method through experiments using a deep-learning pipeline for automatic nuclei segmentation on colorectal images. Our results show that by leveraging multiple reference images, better results can be achieved when generalizing to external data, where the staining can widely differ from the training set.

Multi‑target stain normalization for histology slides

Desislav Ivanov;Carlo Alberto Barbano
;
Marco Grangetto
2025-01-01

Abstract

Traditional staining normalization approaches, e.g. Macenko, typically rely on the choice of a single representative reference image, which may not adequately account for the diverse staining patterns of datasets collected in practical scenarios. In this study, we introduce a novel approach that leverages multiple reference images to enhance robustness against stain variation. Our method is parameter-free and can be adopted in existing computational pathology pipelines with no significant changes. We evaluate the effectiveness of our method through experiments using a deep-learning pipeline for automatic nuclei segmentation on colorectal images. Our results show that by leveraging multiple reference images, better results can be achieved when generalizing to external data, where the staining can widely differ from the training set.
2025
2nd International Workshop on Medical Optical Imaging and Virtual Microscopy Image Analysis, MOVI 2024, held in conjunction with 26th International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2024
Marrakesh, Morocco
10/10/2024
Medical Optical Imaging and Virtual Microscopy Image Analysis
Springer
1
4
978-3-031-77785-1
https://arxiv.org/pdf/2406.02077
Deep learning, Histopathology, Stain Normalization
Desislav Ivanov, Carlo Alberto Barbano, Marco Grangetto
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2318/2044894
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