The CWC simulator is a simulation tool for the Calculus of Wrapped Compartments (CWC) that is based on Gillespie’s direct method supporting the simulation and the analysis simulating biological phenomena. The CWC simulator is parallel application able to exploit the full power of multicore platforms by way of the fastflow lock-free C++ library. Starting from version 0.6, the CWC simulator includes a powerful parallel engine for computing on-line statistics and mining of simulation outputs.

CWC parallel simulator with on-line statistics

ALDINUCCI, MARCO;DROCCO, MAURIZIO;COPPO, Mario;TROINA, ANGELO;SCIACCA, EVA;SPINELLA, SALVATORE
2011-01-01

Abstract

The CWC simulator is a simulation tool for the Calculus of Wrapped Compartments (CWC) that is based on Gillespie’s direct method supporting the simulation and the analysis simulating biological phenomena. The CWC simulator is parallel application able to exploit the full power of multicore platforms by way of the fastflow lock-free C++ library. Starting from version 0.6, the CWC simulator includes a powerful parallel engine for computing on-line statistics and mining of simulation outputs.
0.6.1
Dipartimento di Informatica, Università di Torino.
http://sourceforge.net/projects/cwcsimulator/
Bioinformatics; Gillespie; simulation; Monte Carlo methods; parallel; multicore; fastflow; lock-free programming; high-performance; data mining.
Marco Aldinucci; Maurizio Drocco; Mario Coppo; Angelo Troina; Eva Sciacca; Salvatore Spinella
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2318/100643
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